Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
GCP1 | RCOM_1195950 | B9RD99 | B9SQ70 | Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance. | Molybdopterin cofactor sulfurase, putative. | 0.450 |
RCOM_0144390 | RCOM_1032820 | B9T514 | B9RJB1 | Cytochrome B5 isoform 1, putative; Belongs to the cytochrome b5 family. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.588 |
RCOM_0144390 | RCOM_1195950 | B9T514 | B9SQ70 | Cytochrome B5 isoform 1, putative; Belongs to the cytochrome b5 family. | Molybdopterin cofactor sulfurase, putative. | 0.455 |
RCOM_1032820 | RCOM_0144390 | B9RJB1 | B9T514 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Cytochrome B5 isoform 1, putative; Belongs to the cytochrome b5 family. | 0.588 |
RCOM_1032820 | RCOM_1195950 | B9RJB1 | B9SQ70 | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Molybdopterin cofactor sulfurase, putative. | 0.908 |
RCOM_1195950 | GCP1 | B9SQ70 | B9RD99 | Molybdopterin cofactor sulfurase, putative. | Probable tRNA N6-adenosine threonylcarbamoyltransferase, mitochondrial; Required for the formation of a threonylcarbamoyl group on adenosine at position 37 (t(6)A37) in mitochondrial tRNAs that read codons beginning with adenine. Probably involved in the transfer of the threonylcarbamoyl moiety of threonylcarbamoyl-AMP (TC-AMP) to the N6 group of A37. Involved in mitochondrial genome maintenance. | 0.450 |
RCOM_1195950 | RCOM_0144390 | B9SQ70 | B9T514 | Molybdopterin cofactor sulfurase, putative. | Cytochrome B5 isoform 1, putative; Belongs to the cytochrome b5 family. | 0.455 |
RCOM_1195950 | RCOM_1032820 | B9SQ70 | B9RJB1 | Molybdopterin cofactor sulfurase, putative. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.908 |