STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0484650Light-inducible protein CPRF-2, putative. (453 aa)    
Predicted Functional Partners:
RCOM_0924540
Transcription factor hy5, putative.
   
0.886
RCOM_1004100
Transcription factor HY5, putative.
   
 0.886
RCOM_1105770
Transcription factor hy5, putative.
   
 0.886
RCOM_0679520
Uncharacterized protein.
   
 
 0.622
RCOM_0656100
Eif2alpha kinase, putative.
    
 
 0.599
RCOM_1509350
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.546
RCOM_0792890
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.546
RCOM_0575930
Histone deacetylase; Belongs to the histone deacetylase family. HD Type 1 subfamily.
    
 0.546
RCOM_1347180
Ocs element-binding factor, putative.
   
 
0.545
RCOM_1000260
Ocs element-binding factor, putative.
   
 
 0.545
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.