STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0411580Uncharacterized protein. (295 aa)    
Predicted Functional Partners:
RCOM_1616510
2-hydroxyacid dehydrogenase, putative.
     
 0.608
RCOM_1082550
Protein kinase domain-containing protein.
    
 
 0.528
RCOM_0900580
Delta 9 desaturase, putative; Belongs to the fatty acid desaturase type 1 family.
    
 
 0.526
RCOM_1758470
Strictosidine synthase, putative.
      
 0.524
RCOM_1635180
Hydroxymethylglutaryl-CoA lyase, putative.
      
 0.495
RCOM_1466510
Guanylate kinase-like domain-containing protein.
  
 
 0.454
RCOM_1206840
Synaptic glycoprotein SC2, putative.
    
 
 0.453
RCOM_1281710
Expressed protein, putative.
  
     0.449
RCOM_1119640
Acyl-coenzyme A oxidase; Belongs to the acyl-CoA oxidase family.
   
 
 0.448
RCOM_0293140
Uncharacterized protein.
  
   
 0.440
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.