STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0331400DNA binding protein, putative. (515 aa)    
Predicted Functional Partners:
RCOM_1403260
Malonyl-CoA: ACP Acyltransferase (MCAAT).
      
 0.566
RCOM_0554250
Transcription factor RF2a, putative.
      
 0.509
RCOM_0205170
DNA binding protein, putative.
      
 0.509
RCOM_1437950
Uncharacterized protein.
  
     0.502
RCOM_0084140
Dihydroorotate dehydrogenase, putative.
   
  
 0.499
RCOM_1621120
Uncharacterized protein.
  
 
   0.481
RCOM_1756120
Uncharacterized protein.
  
     0.469
RCOM_1940770
Aldedh domain-containing protein.
     
 0.469
RCOM_1431030
Uncharacterized protein.
  
    0.464
RCOM_0535530
Auxilin, putative.
  
     0.462
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.