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XP_002534416.1 protein (Ricinus communis) - STRING interaction network
"XP_002534416.1" - LOB domain-containing protein, putative in Ricinus communis
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
XP_002534416.1LOB domain-containing protein, putative; Encoded by transcript RCOM_0245570A (225 aa)    
Predicted Functional Partners:
XP_002519813.1
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (1109 aa)
           
  0.757
XP_002516230.1
Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5’-TGTCTC-3’ found in the auxin-responsive promoter elements (AuxREs) (1119 aa)
           
  0.756
XP_002523599.1
RALFL33, putative; Encoded by transcript RCOM_1408850A (128 aa)
           
  0.668
XP_002522767.1
Zinc transporter, putative; Encoded by transcript RCOM_0522420A (350 aa)
           
  0.663
XP_002533624.1
Kinase, putative; Encoded by transcript RCOM_0995940A; Belongs to the carbohydrate kinase PfkB family (370 aa)
           
  0.609
XP_002532030.1
Structural maintenance of chromosomes protein; Encoded by transcript RCOM_0499140A; Gene spans sequencing gaps and may be missing exons (1220 aa)
           
  0.609
XP_002530460.1
Transcription cofactor, putative; Encoded by transcript RCOM_0011080A (1382 aa)
           
  0.609
XP_002528834.1
Uncharacterized protein; Encoded by transcript RCOM_1169250A (323 aa)
           
  0.609
XP_002528819.1
Peroxisomal membrane protein 2, pxmp2, putative; Encoded by transcript RCOM_1168390A; Belongs to the peroxisomal membrane protein PXMP2/4 family (176 aa)
           
  0.609
XP_002528369.1
Uncharacterized protein; Encoded by transcript RCOM_1217860A (121 aa)
           
  0.609
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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