Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
RCOM_0225530 | RCOM_0245570 | B9SVY5 | B9T847 | E2F4,5, putative. | LOB domain-containing protein, putative. | 0.518 |
RCOM_0245570 | RCOM_0225530 | B9T847 | B9SVY5 | LOB domain-containing protein, putative. | E2F4,5, putative. | 0.518 |
RCOM_0245570 | RCOM_0679520 | B9T847 | B9RSY8 | LOB domain-containing protein, putative. | Uncharacterized protein. | 0.559 |
RCOM_0245570 | RCOM_0710450 | B9T847 | B9RR61 | LOB domain-containing protein, putative. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.628 |
RCOM_0245570 | RCOM_0726260 | B9T847 | B9SFY9 | LOB domain-containing protein, putative. | Uncharacterized protein. | 0.510 |
RCOM_0245570 | RCOM_1031400 | B9T847 | B9RJ49 | LOB domain-containing protein, putative. | Amino acid transporter, putative. | 0.508 |
RCOM_0245570 | RCOM_1096960 | B9T847 | B9SFF4 | LOB domain-containing protein, putative. | Protein kinase domain-containing protein. | 0.504 |
RCOM_0245570 | RCOM_1320640 | B9T847 | B9SI52 | LOB domain-containing protein, putative. | Protein WUSCHEL, putative. | 0.495 |
RCOM_0245570 | RCOM_1454040 | B9T847 | B9RGH1 | LOB domain-containing protein, putative. | GRAM domain-containing protein. | 0.499 |
RCOM_0245570 | RCOM_1550630 | B9T847 | B9RPR3 | LOB domain-containing protein, putative. | SET domain-containing protein. | 0.551 |
RCOM_0245570 | RCOM_1593330 | B9T847 | B9R7N2 | LOB domain-containing protein, putative. | Exocyst complex component sec3, putative. | 0.504 |
RCOM_0679520 | RCOM_0245570 | B9RSY8 | B9T847 | Uncharacterized protein. | LOB domain-containing protein, putative. | 0.559 |
RCOM_0710450 | RCOM_0245570 | B9RR61 | B9T847 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | LOB domain-containing protein, putative. | 0.628 |
RCOM_0710450 | RCOM_1031400 | B9RR61 | B9RJ49 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | Amino acid transporter, putative. | 0.539 |
RCOM_0710450 | RCOM_1550630 | B9RR61 | B9RPR3 | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | SET domain-containing protein. | 0.640 |
RCOM_0726260 | RCOM_0245570 | B9SFY9 | B9T847 | Uncharacterized protein. | LOB domain-containing protein, putative. | 0.510 |
RCOM_0726260 | RCOM_1096960 | B9SFY9 | B9SFF4 | Uncharacterized protein. | Protein kinase domain-containing protein. | 0.501 |
RCOM_0726260 | RCOM_1454040 | B9SFY9 | B9RGH1 | Uncharacterized protein. | GRAM domain-containing protein. | 0.498 |
RCOM_1031400 | RCOM_0245570 | B9RJ49 | B9T847 | Amino acid transporter, putative. | LOB domain-containing protein, putative. | 0.508 |
RCOM_1031400 | RCOM_0710450 | B9RJ49 | B9RR61 | Amino acid transporter, putative. | Auxin response factor; Auxin response factors (ARFs) are transcriptional factors that bind specifically to the DNA sequence 5'-TGTCTC-3' found in the auxin-responsive promoter elements (AuxREs). | 0.539 |
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