STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RCOM_0141700Uncharacterized protein. (422 aa)    
Predicted Functional Partners:
RCOM_1612260
Uncharacterized protein.
  
     0.482
RCOM_0413290
Synaptotagmin, putative.
  
  
  0.471
RCOM_0174860
Signal transducer, putative; Belongs to the NPH3 family.
  
     0.467
RCOM_1081900
Transcription regulator, putative.
  
     0.466
RCOM_1679060
TLC domain-containing protein.
  
     0.463
RCOM_1686450
Synaptotagmin, putative.
  
  
  0.457
RCOM_0404520
Synaptotagmin, putative.
  
  
  0.456
RCOM_1731950
Uncharacterized protein.
  
     0.454
RCOM_1038590
TRANSPORT INHIBITOR RESPONSE 1 protein, putative.
  
  
 0.453
RCOM_0924620
Uncharacterized protein.
  
     0.453
Your Current Organism:
Ricinus communis
NCBI taxonomy Id: 3988
Other names: R. communis, Ricinus communis L., Ricinus sanguineus, Ricinus sanguineus hort. ex Groenl., castor bean
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.