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CKS1 protein (Oryza sativa Indica) - STRING interaction network
"CKS1" - cDNA clone:J023130M16, full insert sequence [source:UniProtKB/TrEMBL in Oryza sativa Indica
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CKS1cDNA clone-J023130M16, full insert sequence [source-UniProtKB/TrEMBL;Acc-B7F768_ORYSJ]; Binds to the catalytic subunit of the cyclin dependent kinases and is essential for their biological function (90 aa)    
Predicted Functional Partners:
OsI_09750
Putative uncharacterized protein (315 aa)
     
  0.974
OsI_09676
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-B8ALF1_ORYSI] (294 aa)
     
  0.974
OsI_05651
Putative uncharacterized protein (324 aa)
     
  0.974
OsI_29864
Putative uncharacterized protein (760 aa)
     
  0.973
OsI_29856
Putative uncharacterized protein (326 aa)
     
  0.973
CDKF-1
Japonica Group Os06g0334400 (Os06g0334400) mRNA, complete cds [source-RefSeq DNA;Acc-NM_001064086.1] (479 aa)
     
  0.973
OsI_20353
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-B8AZA5_ORYSI] (591 aa)
     
  0.973
OsI_20870
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-B8AWA3_ORYSI] (559 aa)
     
  0.973
OsI_07276
Putative uncharacterized protein (201 aa)
     
  0.973
OsI_03119
Putative uncharacterized protein [source-UniProtKB/TrEMBL;Acc-B8A6V2_ORYSI] (581 aa)
     
  0.973
Your Current Organism:
Oryza sativa Indica
NCBI taxonomy Id: 39946
Other names: Indian rice, O. sativa Indica Group, Oryza sativa (indica cultivar-group), Oryza sativa (indica group), Oryza sativa Aus Group, Oryza sativa Indica Group, Oryza sativa aus, Oryza sativa aus cultivar-group, Oryza sativa indica, Oryza sativa subsp. indica, Oryza sativa subsp. indica Kato, Oryza sp. Poi-6
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