STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0V3U1Os01g0549000 protein. (284 aa)    
Predicted Functional Partners:
B7EU45_ORYSJ
cDNA clone:J033118O22, full insert sequence.
  
  
 
0.880
B9GA71_ORYSJ
Os11g0249400 protein.
  
  
 
0.879
Q7X6F6_ORYSJ
Os04g0640700 protein.
    
 0.879
Q84ZN9_ORYSJ
Os07g0208200 protein.
  
  
 
0.877
Q2QZ84_ORYSJ
Glycosyl hydrolase family 3 C terminal domain containing protein.
    
  0.872
Q2QY88_ORYSJ
Alpha-L-arabinofuranosidase C-terminus family protein, expressed.
     
 0.849
Q2RAZ7_ORYSJ
Alpha-L-arabinofuranosidase C-terminus family protein, expressed.
     
 0.849
Q0JNF8_ORYSJ
Os01g0296700 protein.
    
  0.810
Q5VNP4_ORYSJ
Os01g0636500 protein.
  
  
 
0.792
A0A0P0Y1K3
Os11g0291000 protein.
    
  0.694
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.