STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0VCC3Os01g0924933 protein. (447 aa)    
Predicted Functional Partners:
A0A0P0Y2T0
Os11g0507200 protein.
  
 
 
0.853
Q0JDF4_ORYSJ
Os04g0407900 protein; Belongs to the cytochrome P450 family.
    
  0.853
Q653Y4_ORYSJ
Os06g0680700 protein; Belongs to the cytochrome P450 family.
    
  0.853
Q8S7V0_ORYSJ
Cytochrome P450 family protein, expressed.
    
  0.853
Q6ESH0_ORYSJ
cDNA clone:J023003E06, full insert sequence; Belongs to the cytochrome P450 family.
    
  0.808
Q7XSQ8_ORYSJ
cDNA clone:001-205-H12, full insert sequence; Belongs to the cytochrome P450 family.
    
  0.808
A0A0P0WHC1
Os05g0122400 protein.
     
 0.802
Q0DHI3_ORYSJ
Os05g0463900 protein.
     
 0.802
Q6Z5C5_ORYSJ
cDNA clone:J033121L24, full insert sequence.
    
 0.669
A0A0N7KJJ5
Os04g0573900 protein.
    
  0.647
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.