STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0W9F4Os04g0380000 protein. (162 aa)    
Predicted Functional Partners:
Q8H4X9_ORYSJ
cDNA clone:J013002G12, full insert sequence.
  
 0.827
Q7EYM9_ORYSJ
Os08g0379300 protein.
   
 0.819
OSKbeta1
SNF1-related protein kinase regulatory beta subunit 1, putative, expressed.
   
 0.811
Q6F337_ORYSJ
cDNA clone:J013157L19, full insert sequence.
   
 0.811
Q8LIG2_ORYSJ
cDNA clone:J023150G03, full insert sequence.
   
 0.811
Q69NJ8_ORYSJ
cDNA clone:J013133A10, full insert sequence.
   
 0.801
Q109X1_ORYSJ
cDNA clone:J013155I02, full insert sequence.
   
 0.783
Q109X3_ORYSJ
Os10g0206500 protein.
   
 0.783
FLO6
Protein FLOURY ENDOSPERM 6, chloroplastic; Involved in compound starch granule formation and starch synthesis in endosperm. May act as a regulatory scaffolding protein and affect starch synthesis and compound starch granule formation through direct interaction with isoamylase 1 (ISA1). Binds starch, amylopectin and amylose through its C-terminal carbohydrate-binding domain (CBM) in vitro.
   
 0.783
Q6Z0Y8_ORYSJ
Os02g0135900 protein.
   
 0.783
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.