STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0WTB6Os06g0186500 protein. (617 aa)    
Predicted Functional Partners:
A0A0P0XDN7
Os08g0240600 protein.
   
 0.992
Q6Z7I5_ORYSJ
Os02g0329300 protein.
    
 0.983
B7EDS1_ORYSJ
cDNA clone:J013113P22, full insert sequence.
   
 0.952
Q656G9_ORYSJ
cDNA clone:J013112E08, full insert sequence.
   
 0.952
Q6YPC4_ORYSJ
Os08g0567200 protein.
   
 0.952
A0A0P0VDY5
Os02g0119100 protein.
     
 0.854
Q6H4U2_ORYSJ
Os09g0267500 protein.
   
 0.830
TUBG2
Tubulin gamma-2 chain; Tubulin is the major constituent of microtubules. The gamma chain is found at microtubule organizing centers (MTOC) such as the spindle poles, suggesting that it is involved in the minus-end nucleation of microtubule assembly.
     
 0.755
MOR1
Protein MOR1; Microtubule-associated protein that is essential for cortical microtubules organization and function; Belongs to the TOG/XMAP215 family.
  
  
  0.685
A0A0N7KIL7
Os04g0182600 protein.
  
 
  0.672
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.