STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
A0A0P0XV01Os10g0436800 protein. (250 aa)    
Predicted Functional Partners:
A0A0P0XT12
Os10g0190800 protein.
  
 
 0.865
Q94E74_ORYSJ
cDNA clone:J023069J05, full insert sequence.
  
 
 0.749
Os01g0784800
cDNA clone:006-205-D02, full insert sequence.
  
  
0.747
Q60EJ3_ORYSJ
cDNA clone:006-208-C11, full insert sequence.
  
  
 
0.743
Q6ZKI0_ORYSJ
cDNA clone:J023054M12, full insert sequence.
  
  
 
0.743
Q53N80_ORYSJ
Rieske domain containing protein, expressed.
    
 0.694
A0A0P0V8H7
Os01g0757900 protein.
    
  0.664
A0A0P0XT88
Os10g0209300 protein.
    
  0.664
GLN
HAD-superfamily hydrolase, subfamily IA, variant 3 containing protein, expressed.
    
  0.664
A0A0P0Y1E8
Os11g0303050 protein.
   
 
 0.662
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.