Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0P0V2J4 | NIA1 | A0A0P0V2J4 | P16081 | Os01g0357500 protein. | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.973 |
A0A0P0V2J4 | NRT2.1 | A0A0P0V2J4 | P0DKG9 | Os01g0357500 protein. | High-affinity nitrate transporter 2.1; Involved in nitrate transport, but does not seem to be able to mediate transport by its own. Acts as a dual component transporter with NAR2.1. Imports nitrate with high affinity when expressed with NAR2.1 in a heterologous system (Xenopus oocytes). | 0.754 |
A0A0P0V2J4 | NRT2.2 | A0A0P0V2J4 | P0DKH0 | Os01g0357500 protein. | High-affinity nitrate transporter 2.2; Involved in nitrate transport, but does not seem to be able to mediate transport by its own. Acts as a dual component transporter with NAR2.1. Imports nitrate with high affinity when expressed with NAR2.1 in a heterologous system (Xenopus oocytes). | 0.754 |
A0A0P0V2J4 | NRT2.4 | A0A0P0V2J4 | A2ZU80 | Os01g0357500 protein. | Probable high-affinity nitrate transporter 2.4; Involved in nitrate transport; Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family. | 0.754 |
A0A0P0V2J4 | Q53N80_ORYSJ | A0A0P0V2J4 | Q53N80 | Os01g0357500 protein. | Rieske domain containing protein, expressed. | 0.882 |
A0A0P0V2J4 | Q6ZC33_ORYSJ | A0A0P0V2J4 | Q6ZC33 | Os01g0357500 protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.973 |
A0A0P0V2J4 | Q6ZHH7_ORYSJ | A0A0P0V2J4 | Q6ZHH7 | Os01g0357500 protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.973 |
A0A0P0VPW9 | NIA1 | A0A0P0VPW9 | P16081 | Os02g0765900 protein. | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.973 |
A0A0P0VPW9 | NRT2.1 | A0A0P0VPW9 | P0DKG9 | Os02g0765900 protein. | High-affinity nitrate transporter 2.1; Involved in nitrate transport, but does not seem to be able to mediate transport by its own. Acts as a dual component transporter with NAR2.1. Imports nitrate with high affinity when expressed with NAR2.1 in a heterologous system (Xenopus oocytes). | 0.923 |
A0A0P0VPW9 | NRT2.2 | A0A0P0VPW9 | P0DKH0 | Os02g0765900 protein. | High-affinity nitrate transporter 2.2; Involved in nitrate transport, but does not seem to be able to mediate transport by its own. Acts as a dual component transporter with NAR2.1. Imports nitrate with high affinity when expressed with NAR2.1 in a heterologous system (Xenopus oocytes). | 0.923 |
A0A0P0VPW9 | NRT2.4 | A0A0P0VPW9 | A2ZU80 | Os02g0765900 protein. | Probable high-affinity nitrate transporter 2.4; Involved in nitrate transport; Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family. | 0.896 |
A0A0P0VPW9 | Q53N80_ORYSJ | A0A0P0VPW9 | Q53N80 | Os02g0765900 protein. | Rieske domain containing protein, expressed. | 0.882 |
A0A0P0VPW9 | Q6ZC33_ORYSJ | A0A0P0VPW9 | Q6ZC33 | Os02g0765900 protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.973 |
A0A0P0VPW9 | Q6ZHH7_ORYSJ | A0A0P0VPW9 | Q6ZHH7 | Os02g0765900 protein. | Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | 0.973 |
NIA1 | A0A0P0V2J4 | P16081 | A0A0P0V2J4 | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Os01g0357500 protein. | 0.973 |
NIA1 | A0A0P0VPW9 | P16081 | A0A0P0VPW9 | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Os02g0765900 protein. | 0.973 |
NIA1 | NRT2.1 | P16081 | P0DKG9 | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | High-affinity nitrate transporter 2.1; Involved in nitrate transport, but does not seem to be able to mediate transport by its own. Acts as a dual component transporter with NAR2.1. Imports nitrate with high affinity when expressed with NAR2.1 in a heterologous system (Xenopus oocytes). | 0.987 |
NIA1 | NRT2.2 | P16081 | P0DKH0 | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | High-affinity nitrate transporter 2.2; Involved in nitrate transport, but does not seem to be able to mediate transport by its own. Acts as a dual component transporter with NAR2.1. Imports nitrate with high affinity when expressed with NAR2.1 in a heterologous system (Xenopus oocytes). | 0.985 |
NIA1 | NRT2.4 | P16081 | A2ZU80 | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Probable high-affinity nitrate transporter 2.4; Involved in nitrate transport; Belongs to the major facilitator superfamily. Nitrate/nitrite porter (TC 2.A.1.8) family. | 0.980 |
NIA1 | P0025H06.19-1 | P16081 | Q42997 | Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria. | Ferredoxin--nitrite reductase, chloroplastic; Catalyzes the six-electron reduction of nitrite to ammonium. | 0.978 |
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