STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ROC7Homeobox-leucine zipper protein ROC7; Probable transcription factor; Belongs to the HD-ZIP homeobox family. Class IV subfamily. (749 aa)    
Predicted Functional Partners:
OSH10
Homeobox protein knotted-1-like 4.
    
 
 0.601
CYCH1-1
Cyclin-H1-1; Involved in cell cycle regulation. May be a regulatory subunit of CDKD-1/CAK-R2.
     
 0.593
A0A0P0V1T6
Os01g0314700 protein.
    
 0.589
A0A0P0VYI6
Sulfotransferase; Belongs to the sulfotransferase 1 family.
  
 
   0.545
Q69P44_ORYSJ
Os09g0423300 protein.
    
  0.523
NAL1
Protein NARROW LEAF 1; Involved in the regulation of lateral leaf growth. May be involved in the regulation of basipetal polar auxin transport (PAT) and vascular patterning in leaves. Controls photosynthesis rate by regulating carboxylation efficiency and consequently photosynthesis rate. Controls panicle and spikelet numbers, and grain yield.
  
 
   0.517
OSH3
Homeobox protein knotted-1-like 7; Probable transcription factor that may be involved in shoot formation during embryogenesis; Belongs to the TALE/KNOX homeobox family.
    
 
 0.512
Q6Z9X3_ORYSJ
cDNA clone:J013111J10, full insert sequence.
  
 
   0.511
A0A0P0WZZ8
Os06g0654900 protein.
    
 0.484
Q0DY89_ORYSJ
Os02g0708600 protein.
    
 0.484
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.