STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C7J6D5_ORYSJOs08g0123300 protein. (105 aa)    
Predicted Functional Partners:
OS9
Protein OS-9 homolog; Lectin which functions in endoplasmic reticulum (ER) quality control and ER-associated degradation (ERAD). May bind terminally misfolded non-glycosylated proteins as well as improperly folded glycoproteins, retain them in the ER, and possibly transfer them to the ubiquitination machinery and promote their degradation.
   
 0.954
DER1
Derlin-1; May be involved in the degradation process of specific misfolded endoplasmic reticulum (ER) luminal proteins.
    
 0.934
DER2
Derlin-2; May be involved in the degradation process of specific misfolded endoplasmic reticulum (ER) luminal proteins; Belongs to the derlin family.
    
 0.934
HRD3
ERAD-associated E3 ubiquitin-protein ligase component HRD3; Component of the endoplasmic reticulum (ER) quality control system called ER-associated degradation (ERAD) and involved in ubiquitin-dependent degradation of misfolded endoplasmic reticulum proteins. Functions as an ERAD substrate-recruiting factor that recognizes misfolded proteins for the HRD1 E3 ubiquitin ligase complex. Belongs to the sel-1 family.
    
 0.907
Q6ZHU4_ORYSJ
cDNA clone:J013150O18, full insert sequence.
    
 0.907
Q7XKU0_ORYSJ
Os04g0476000 protein.
    
 0.907
A0A0P0XFK3
Os08g0413000 protein.
    
 0.861
B7E390_ORYSJ
cDNA clone:001-008-E02, full insert sequence; Belongs to the AAA ATPase family.
    
 0.861
Q0JC08_ORYSJ
Os04g0498800 protein; Belongs to the AAA ATPase family.
    
 0.861
Q10RP0_ORYSJ
Cell division cycle protein 48, putative, expressed.
    
 0.861
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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