Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| 4CL1 | 4CL2 | P17814 | Q42982 | Probable 4-coumarate--CoA ligase 1; Belongs to the ATP-dependent AMP-binding enzyme family. | Probable 4-coumarate--CoA ligase 2. | 0.684 |
| 4CL1 | OsC4HL | P17814 | Q5W6F1 | Probable 4-coumarate--CoA ligase 1; Belongs to the ATP-dependent AMP-binding enzyme family. | cDNA clone:001-002-H11, full insert sequence; Belongs to the cytochrome P450 family. | 0.936 |
| 4CL1 | PAL | P17814 | P14717 | Probable 4-coumarate--CoA ligase 1; Belongs to the ATP-dependent AMP-binding enzyme family. | Phenylalanine ammonia-lyase; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton. | 0.984 |
| 4CL2 | 4CL1 | Q42982 | P17814 | Probable 4-coumarate--CoA ligase 2. | Probable 4-coumarate--CoA ligase 1; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.684 |
| 4CL2 | 4CL3 | Q42982 | Q6ETN3 | Probable 4-coumarate--CoA ligase 2. | Probable 4-coumarate--CoA ligase 3. | 0.681 |
| 4CL2 | 4CL4 | Q42982 | Q67W82 | Probable 4-coumarate--CoA ligase 2. | Probable 4-coumarate--CoA ligase 4; Belongs to the ATP-dependent AMP-binding enzyme family. | 0.681 |
| 4CL2 | 4CL5 | Q42982 | Q6ZAC1 | Probable 4-coumarate--CoA ligase 2. | Probable 4-coumarate--CoA ligase 5. | 0.681 |
| 4CL2 | OsC4HL | Q42982 | Q5W6F1 | Probable 4-coumarate--CoA ligase 2. | cDNA clone:001-002-H11, full insert sequence; Belongs to the cytochrome P450 family. | 0.931 |
| 4CL2 | PAL | Q42982 | P14717 | Probable 4-coumarate--CoA ligase 2. | Phenylalanine ammonia-lyase; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton. | 0.976 |
| 4CL3 | 4CL2 | Q6ETN3 | Q42982 | Probable 4-coumarate--CoA ligase 3. | Probable 4-coumarate--CoA ligase 2. | 0.681 |
| 4CL3 | OsC4HL | Q6ETN3 | Q5W6F1 | Probable 4-coumarate--CoA ligase 3. | cDNA clone:001-002-H11, full insert sequence; Belongs to the cytochrome P450 family. | 0.921 |
| 4CL3 | PAL | Q6ETN3 | P14717 | Probable 4-coumarate--CoA ligase 3. | Phenylalanine ammonia-lyase; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton. | 0.975 |
| 4CL4 | 4CL2 | Q67W82 | Q42982 | Probable 4-coumarate--CoA ligase 4; Belongs to the ATP-dependent AMP-binding enzyme family. | Probable 4-coumarate--CoA ligase 2. | 0.681 |
| 4CL4 | OsC4HL | Q67W82 | Q5W6F1 | Probable 4-coumarate--CoA ligase 4; Belongs to the ATP-dependent AMP-binding enzyme family. | cDNA clone:001-002-H11, full insert sequence; Belongs to the cytochrome P450 family. | 0.900 |
| 4CL4 | PAL | Q67W82 | P14717 | Probable 4-coumarate--CoA ligase 4; Belongs to the ATP-dependent AMP-binding enzyme family. | Phenylalanine ammonia-lyase; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton. | 0.976 |
| 4CL5 | 4CL2 | Q6ZAC1 | Q42982 | Probable 4-coumarate--CoA ligase 5. | Probable 4-coumarate--CoA ligase 2. | 0.681 |
| 4CL5 | OsC4HL | Q6ZAC1 | Q5W6F1 | Probable 4-coumarate--CoA ligase 5. | cDNA clone:001-002-H11, full insert sequence; Belongs to the cytochrome P450 family. | 0.911 |
| 4CL5 | PAL | Q6ZAC1 | P14717 | Probable 4-coumarate--CoA ligase 5. | Phenylalanine ammonia-lyase; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton. | 0.975 |
| 4CLL1 | OsC4HL | Q0DV32 | Q5W6F1 | 4-coumarate--CoA ligase-like 1. | cDNA clone:001-002-H11, full insert sequence; Belongs to the cytochrome P450 family. | 0.897 |
| 4CLL1 | PAL | Q0DV32 | P14717 | 4-coumarate--CoA ligase-like 1. | Phenylalanine ammonia-lyase; This is a key enzyme of plant metabolism catalyzing the first reaction in the biosynthesis from L-phenylalanine of a wide variety of natural products based on the phenylpropane skeleton. | 0.956 |
page 1 of 3