Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
A0A0P0WDW6 | A0A0P0WFD3 | A0A0P0WDW6 | A0A0P0WFD3 | Os04g0572600 protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.936 |
A0A0P0WDW6 | A0A0P0X0W6 | A0A0P0WDW6 | A0A0P0X0W6 | Os04g0572600 protein. | Os06g0697400 protein. | 0.890 |
A0A0P0WDW6 | Q0J7Q4_ORYSJ | A0A0P0WDW6 | Q0J7Q4 | Os04g0572600 protein. | Os08g0171600 protein. | 0.936 |
A0A0P0WDW6 | Q6YX88_ORYSJ | A0A0P0WDW6 | Q6YX88 | Os04g0572600 protein. | cDNA clone:006-305-H09, full insert sequence. | 0.904 |
A0A0P0WDW6 | Q6ZA50_ORYSJ | A0A0P0WDW6 | Q6ZA50 | Os04g0572600 protein. | cDNA clone:J013053F13, full insert sequence. | 0.939 |
A0A0P0WDW6 | Q84SP5_ORYSJ | A0A0P0WDW6 | Q84SP5 | Os04g0572600 protein. | RNA polymerase Rpb8 family protein, expressed; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. | 0.890 |
A0A0P0WDW6 | RDR1 | A0A0P0WDW6 | Q0DXS3 | Os04g0572600 protein. | Probable RNA-dependent RNA polymerase 1; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs); Belongs to the RdRP family. | 0.830 |
A0A0P0WFD3 | A0A0P0WDW6 | A0A0P0WFD3 | A0A0P0WDW6 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os04g0572600 protein. | 0.936 |
A0A0P0WFD3 | A0A0P0WJV1 | A0A0P0WFD3 | A0A0P0WJV1 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os05g0230200 protein. | 0.936 |
A0A0P0WFD3 | A0A0P0X0W6 | A0A0P0WFD3 | A0A0P0X0W6 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os06g0697400 protein. | 0.973 |
A0A0P0WFD3 | A0A0P0XQV4 | A0A0P0WFD3 | A0A0P0XQV4 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os09g0555187 protein. | 0.936 |
A0A0P0WFD3 | Q0IZR2_ORYSJ | A0A0P0WFD3 | Q0IZR2 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os09g0555200 protein. | 0.936 |
A0A0P0WFD3 | Q0J7Q4_ORYSJ | A0A0P0WFD3 | Q0J7Q4 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Os08g0171600 protein. | 0.544 |
A0A0P0WFD3 | Q6YX88_ORYSJ | A0A0P0WFD3 | Q6YX88 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | cDNA clone:006-305-H09, full insert sequence. | 0.996 |
A0A0P0WFD3 | Q6ZA50_ORYSJ | A0A0P0WFD3 | Q6ZA50 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | cDNA clone:J013053F13, full insert sequence. | 0.987 |
A0A0P0WFD3 | Q84SP5_ORYSJ | A0A0P0WFD3 | Q84SP5 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | RNA polymerase Rpb8 family protein, expressed; Belongs to the eukaryotic RPB8 RNA polymerase subunit family. | 0.973 |
A0A0P0WFD3 | RDR1 | A0A0P0WFD3 | Q0DXS3 | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | Probable RNA-dependent RNA polymerase 1; Probably involved in the RNA silencing pathway and required for the generation of small interfering RNAs (siRNAs); Belongs to the RdRP family. | 0.793 |
A0A0P0WJV1 | A0A0P0WFD3 | A0A0P0WJV1 | A0A0P0WFD3 | Os05g0230200 protein. | DNA-directed RNA polymerase subunit beta; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. | 0.936 |
A0A0P0WJV1 | A0A0P0X0W6 | A0A0P0WJV1 | A0A0P0X0W6 | Os05g0230200 protein. | Os06g0697400 protein. | 0.890 |
A0A0P0WJV1 | Q0J7Q4_ORYSJ | A0A0P0WJV1 | Q0J7Q4 | Os05g0230200 protein. | Os08g0171600 protein. | 0.936 |
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