STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0J2C7_ORYSJOs09g0359700 protein. (217 aa)    
Predicted Functional Partners:
Q652S1_ORYSJ
cDNA clone:J013116E07, full insert sequence.
  
 
 0.924
Q2QWT8_ORYSJ
2-oxoisovalerate dehydrogenase alpha subunit, mitochondrial, putative, expressed.
  
 
 0.917
Q6H400_ORYSJ
Os09g0394100 protein.
    
 0.906
Q8H3Q7_ORYSJ
Xylose isomerase.
     
 0.905
Q5JLP6_ORYSJ
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
  
 
 0.902
A0A0P0YD07
Os12g0633000 protein.
  
 
 0.884
Q8GRU7_ORYSJ
cDNA clone:J023045I10, full insert sequence.
  
 
 0.884
Q69IN1_ORYSJ
Os09g0514100 protein.
  
 
 0.878
Q6ASW3_ORYSJ
3,4-dihydroxy-2-butanone kinase, putative, expressed.
  
 0.878
Q7XPR2_ORYSJ
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 
 0.878
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.