STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q0JJH3_ORYSJOs01g0738800 protein. (34 aa)    
Predicted Functional Partners:
Q5JK10_ORYSJ
cDNA clone:001-203-A10, full insert sequence.
  
 
 0.962
Q7XWP9_ORYSJ
cDNA clone:J023019B19, full insert sequence.
  
 
 0.959
Q0DEU8_ORYSJ
Os06g0133800 protein.
  
 
 0.955
A0A0P0Y4U5
Os11g0600900 protein; Belongs to the mannose-6-phosphate isomerase type 1 family.
    
 0.949
Q0DKG9_ORYSJ
Os05g0164100 protein.
    
 0.949
Q9FTR6_ORYSJ
Mannose-6-phosphate isomerase; Belongs to the mannose-6-phosphate isomerase type 1 family.
    
 0.949
Q652S1_ORYSJ
cDNA clone:J013116E07, full insert sequence.
  
 
 0.940
OsJ_12779
Glucose-6-phosphate isomerase, cytosolic A; Belongs to the GPI family.
  
 0.939
P0624H09.14
Glucose-6-phosphate isomerase, cytosolic B; Belongs to the GPI family.
  
 0.939
Q6YXI1_ORYSJ
Glucose-6-phosphate isomerase; Belongs to the GPI family.
  
 0.939
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.