STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q10I12_ORYSJcDNA clone:J033087P12, full insert sequence. (500 aa)    
Predicted Functional Partners:
A0A0N7KM25
Os06g0342750 protein.
      
 0.461
A0A0P0WW92
Os06g0343000 protein.
      
 0.461
Q2QXU5_ORYSJ
cDNA clone:J013096C01, full insert sequence.
      
 0.461
Q2RAM9_ORYSJ
DTW domain containing protein.
      
 0.461
Q0DJ61_ORYSJ
Os05g0324200 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
      
 0.450
Q0DJ62_ORYSJ
Os05g0324100 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. Trm1 family.
      
 0.450
Q339G6_ORYSJ
tRNA (guanine(26)-N(2))-dimethyltransferase.
      
 0.450
Q6F3B7_ORYSJ
tRNA (guanine(26)-N(2))-dimethyltransferase.
      
 0.450
Q10QI6_ORYSJ
Probable ribosome biogenesis protein LOC_Os03g09920; Probable pre-rRNA processing protein involved in ribosome biogenesis.
      
 0.414
Q7XUN7_ORYSJ
tRNA-dihydrouridine synthase; Catalyzes the synthesis of dihydrouridine, a modified base found in the D-loop of most tRNAs; Belongs to the dus family.
      
 0.414
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.