STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q2QLR3_ORYSJcDNA clone:J033128O13, full insert sequence. (585 aa)    
Predicted Functional Partners:
PSY3
Phytoene synthase 3, chloroplastic; Catalyzes the conversion of geranylgeranyl diphosphate to phytoene. Mediates the first committed step in carotenoid biosynthesis. May play a role in regulating carotenoid flux in response to abiotic stress in roots. May control flux to carotenoid precursors that are required for abiotic stress-induced abscisic acid (ABA) formation in roots.
  
 
 0.934
O22105_ORYSJ
cDNA, clone: J090011P14, full insert sequence.
  
 
 0.934
PSY2
Phytoene synthase 2, chloroplastic; Catalyzes the conversion of geranylgeranyl diphosphate to phytoene. Mediates the first committed step in carotenoid biosynthesis.
  
 
 0.934
PSY1
Phytoene synthase 1, chloroplastic; Catalyzes the conversion of geranylgeranyl diphosphate to phytoene. Mediates the first committed step in carotenoid biosynthesis.
  
 
 0.934
Q6Z368_ORYSJ
cDNA clone:001-114-B01, full insert sequence.
  
 
 0.934
Q8H625_ORYSJ
cDNA clone:002-149-G11, full insert sequence.
  
 
 0.932
Q6YUU2_ORYSJ
Os02g0190600 protein.
     
 0.906
A0A0P0WDI2
Os04g0561350 protein.
  
 
 0.862
Q5NB98_ORYSJ
Os01g0265000 protein.
  
 
 0.862
CHLP
Geranylgeranyl diphosphate reductase, chloroplastic; Catalyzes the reduction of geranylgeranyl diphosphate to phytyl diphosphate, providing phytol for both tocopherol and chlorophyll synthesis.
  
 
 0.862
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.