STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q2QYK0_ORYSJWRKY DNA binding domain containing protein, expressed. (222 aa)    
Predicted Functional Partners:
Q84T64_ORYSJ
WRKY DNA binding domain containing protein, expressed.
  
   
 0.683
Q5ZEB2_ORYSJ
cDNA clone:002-182-G03, full insert sequence.
  
     0.512
Q10BQ3_ORYSJ
Protease inhibitor/seed storage/LTP family protein, expressed; Belongs to the plant LTP family.
      
 0.509
OJ1080_F08.106
17kDa alpha-amylase/trypsin inhibitor 2; Seed storage protein; Belongs to the cereal trypsin/alpha-amylase inhibitor family.
      
 0.491
A0A0P0WIN4
Os05g0183100 protein.
  
     0.482
WRKY28
WRKY transcription factor WRKY28; Transcription repressor. Interacts specifically with the W box (5'-(T)TGAC[CT]-3'), a frequently occurring elicitor-responsive cis-acting element. Regulates, probably indirectly, the activation of defense-related genes during defense response (By similarity). Modulates plant innate immunity against X.oryzae pv. oryzae (Xoo). Regulates negatively the basal defense responses to the compatible fungus M.oryzae.
  
     0.481
Q0J6R8_ORYSJ
Os08g0276200 protein.
  
     0.476
Q75KW2_ORYSJ
WRKY DNA binding domain containing protein, expressed.
  
     0.472
Q654W7_ORYSJ
Os06g0504900 protein.
  
     0.452
A0A0P0UZM3
Os01g0186000 protein.
  
     0.451
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.