STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RFC1Replication factor C subunit 1; May be involved in DNA replication and thus regulate cell proliferation. (1021 aa)    
Predicted Functional Partners:
RFC3
Replication factor C subunit 3; May be involved in DNA replication and thus regulate cell proliferation.
   
0.996
RFC4
Replication factor C subunit 4; May be involved in DNA replication and thus regulate cell proliferation.
   
0.996
RFC5
Replication factor C subunit 5; May be involved in DNA replication and thus regulate cell proliferation.
   
 0.992
OJ1548_F12.18
Proliferating cell nuclear antigen; This protein is an auxiliary protein of DNA polymerase delta and is involved in the control of eukaryotic DNA replication by increasing the polymerase's processibility during elongation of the leading strand.
   
 0.991
A0A0P0VNR0
Os02g0704966 protein.
   
 0.983
A0A0P0XXI5
Os10g0574500 protein.
   
 0.983
RFC2
Replication factor C subunit 2; May be involved in DNA replication and thus regulate cell proliferation.
   
0.971
A0A0P0WQ51
Os05g0529600 protein.
   
 0.963
A0A0P0XBA8
Os08g0120200 protein.
   
0.963
A0A0P0Y837
Os12g0209300 protein.
   
 0.963
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.