STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q5ZD09_ORYSJcDNA clone:J013047J06, full insert sequence. (273 aa)    
Predicted Functional Partners:
A0A0P0V1T6
Os01g0314700 protein.
    
 0.653
Q0D3X3_ORYSJ
Ubiquitin carboxyl-terminal hydrolase; Recognizes and hydrolyzes the peptide bond at the C-terminal Gly of ubiquitin. Involved in the processing of poly-ubiquitin precursors as well as that of ubiquitinated proteins. Belongs to the peptidase C19 family.
    
  0.636
Q658I3_ORYSJ
Os06g0128300 protein.
    
0.626
Q10LW5_ORYSJ
ATP-dependent transporter ycf16, putative, expressed.
    
 0.624
ACC2
Acetyl-CoA carboxylase 2; Multifunctional enzyme that catalyzes the carboxylation of acetyl-CoA, forming malonyl-CoA, which is used in the plastid for fatty acid synthesis and in the cytosol in various biosynthetic pathways including fatty acid elongation.
   
 0.610
ACC1-2
Acetyl-CoA carboxylase 1; Multifunctional enzyme that catalyzes the carboxylation of acetyl-CoA, forming malonyl-CoA, which is used in the plastid for fatty acid synthesis and in the cytosol in various biosynthetic pathways including fatty acid elongation.
   
 0.610
Q6ATY7_ORYSJ
cDNA clone:J013108A03, full insert sequence.
  
 
 
 0.597
Q6K3D4_ORYSJ
Os02g0281000 protein.
   
 0.588
A0A0N7KG12
Os02g0729400 protein.
    
  0.581
Q6ZGX8_ORYSJ
cDNA clone:J033091B08, full insert sequence; Belongs to the adaptor complexes medium subunit family.
    
  0.581
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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