STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q653C9_ORYSJOs09g0561600 protein. (720 aa)    
Predicted Functional Partners:
C7J1U6_ORYSJ
Os04g0589400 protein.
    
 0.791
A0A0P0V1T6
Os01g0314700 protein.
   
 0.682
A0A0P0XQE9
Os09g0512450 protein.
   
 0.651
Q6K9N9_ORYSJ
cDNA clone:J023012G01, full insert sequence.
   
 0.651
Q65XJ0_ORYSJ
Os05g0104900 protein.
    
  0.613
Q6YXU5_ORYSJ
cDNA clone:002-107-D07, full insert sequence.
    
  0.613
C7J0W5_ORYSJ
Os04g0429200 protein; Belongs to the peptidase C19 family.
    
  0.612
Q6ZH84_ORYSJ
cDNA clone:J013072E12, full insert sequence.
   
 0.592
Q7XK43_ORYSJ
Os04g0476800 protein.
   
 0.592
Q8RUE8_ORYSJ
Putative 3-phosphoinositide-dependent protein kinase-1.
    
 
0.588
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.