STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C3H33_ORYSJZinc finger CCCH domain-containing protein 33. (601 aa)    
Predicted Functional Partners:
Q5NBF4_ORYSJ
Os01g0271500 protein.
    
  0.576
Q5ZDX5_ORYSJ
Os01g0614900 protein.
    
  0.576
ZFP36
Zinc finger protein 36; Probable transcription factor involved in abscisic acid (ABA) signaling. Required for the regulation of the cross-talk between NADPH oxidase, hydrogen peroxide and MAP kinase in ABA signaling. Regulates the expression of the NADPH oxidase genes RBOHB and RBOHE, and the MAPK genes MPK1, MPK4, MPK5, MPK7 and MPK14. Regulates ABA-induced hydrogen peroxide production and antioxidant defense. Required for tolerance to water stress and oxidative stress.
   
  
 0.501
Q6Z538_ORYSJ
Os08g0436700 protein.
      
 0.487
LIS
S-(+)-linalool synthase, chloroplastic; Involved in monoterpene (C10) biosynthesis. The major product is S-(+)-linalool. Linalool production is induced by jasmonate in response to pathogen attack, it possesses antibacterial activity and is important for resistance to the bacterial blight pathogen Xanthomonas oryzae pv. oryzae (Xoo). Plants over-expressing linalool synthase display enhanced resistance to Xoo.
      
 0.465
A0A0P0XWI8
Os10g0489500 protein; Belongs to the terpene synthase family.
      
 0.463
Q10D64_ORYSJ
Transducin family protein, putative, expressed.
      
 0.432
OsJ_002707
Zinc finger CCCH domain-containing protein 9.
      
 0.422
A0A0P0VVP8
Os03g0259500 protein.
    
  0.417
A0A0P0X666
Os07g0493033 protein.
    
  0.417
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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