STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q69X62_ORYSJ3-ketoacyl-CoA synthase. (519 aa)    
Predicted Functional Partners:
A0A0P0VLC3
Os02g0597900 protein.
    
 0.927
Q7XQF8_ORYSJ
cDNA clone:001-019-E03, full insert sequence; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.901
A0A0P0XZG5
Os11g0171400 protein.
   
 0.858
Q2R5M5_ORYSJ
Oxidoreductase, short chain dehydrogenase/reductase family protein, expressed; Belongs to the short-chain dehydrogenases/reductases (SDR) family.
    
 0.852
Q7XT17_ORYSJ
cDNA clone:J013001B01, full insert sequence.
    
 0.831
Q2QMH0_ORYSJ
Tetratricopeptide repeat protein, putative, expressed.
   
 0.816
A0A0P0VWT0
Os03g0281800 protein.
   
 0.813
Q6Z4E4_ORYSJ
cDNA clone:J023108H13, full insert sequence.
   
 0.796
A0A0P0UXE6
Os01g0103700 protein.
   
 0.794
B7EZ59_ORYSJ
cDNA clone:002-100-D10, full insert sequence.
   
 0.794
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.