STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
COA26cDNA clone:002-115-A04, full insert sequence. (234 aa)    
Predicted Functional Partners:
4CL2
Probable 4-coumarate--CoA ligase 2.
   
 0.918
4CLL9
4-coumarate--CoA ligase-like 9.
    
 0.898
AHT1
Agmatine hydroxycinnamoyltransferase 1; Hydroxycinnamoyl transferase that catalyzes the transfer of an acyl from p-coumaryol-CoA to agmatine, to produce coumaroyl agmatine. Can use feruloyl-CoA, caffeoyl-CoA and sinapoyl-CoA as acyl donors. Seems to be able to transfer the acyl group from p-coumaroyl-CoA and feruloyl-CoA to the acyl acceptors putrescine and spermidine.
   
 
 0.865
HCT4
Hydroxycinnamoyltransferase 4; Hydroxycinnamoyl transferase that catalyzes in vitro the transfer of an acyl from p-coumaryol-CoA to glycerol or shikimate, to produce 2-O-p-coumaroyl glyceride or coumaroyl shikimate, respectively. Quercetin, glutarate, or malate do not serve as acyl acceptors in vitro. Can use feruloyl-CoA and caffeoyl-CoA as acyl donors.
   
 
 0.859
CHS1
Chalcone synthase 1; The primary product of this enzyme is 4,2',4',6'- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
     
 0.855
4CLL6
4-coumarate--CoA ligase-like 6.
    
 0.851
COA1
Caffeoyl-CoA O-methyltransferase.
  
  
 
0.842
4CLL5
4-coumarate--CoA ligase-like 5.
    
 0.837
TK
Thymidine kinase.
  
 
  0.834
CHS2
Chalcone synthase 2; The primary product of this enzyme is 4,2',4',6'- tetrahydroxychalcone (also termed naringenin-chalcone or chalcone) which can under specific conditions spontaneously isomerize into naringenin; Belongs to the thiolase-like superfamily. Chalcone/stilbene synthases family.
     
 0.830
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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