STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6H7H6_ORYSJcDNA clone:001-205-B11, full insert sequence. (303 aa)    
Predicted Functional Partners:
Q5JMX7_ORYSJ
Os01g0752500 protein.
     
0.762
A3C052_ORYSJ
cDNA clone:J013047J08, full insert sequence.
     
 0.697
Q6YVT1_ORYSJ
cDNA clone:J023115E06, full insert sequence.
     
 0.697
Q10A97_ORYSJ
cDNA clone:006-211-G07, full insert sequence.
   
 
0.641
B7F8P7_ORYSJ
cDNA, clone: J065136G16, full insert sequence.
   
 
 
0.627
A0A0N7KFW6
Os02g0689132 protein.
     
 0.517
A0A0N7KN89
Os07g0272500 protein.
     
 0.517
EIL1A
Protein ETHYLENE-INSENSITIVE 3-like 1a; Transcription factor acting as a positive regulator in the ethylene response pathway. Required for the inhibition of root growth by ethylene in etiolated seedlings. Functions upstream of the auxin biosynthetic gene YUCCA8 and directly activates its expression. Functions downstream of the ethylene signaling factor EIN2 in disease resistance against the rice blast fungus (Magnaporthe oryzae). Binds directly to the promoters of the NADPH oxidases RBOHA and RBOHB, and the jasmonate biosynthetic gene OPR4 to activate their expression during fungal inf [...]
     
 0.517
EIL2
Protein ETHYLENE-INSENSITIVE 3-like 2; Transcription factor acting as a positive regulator in the ethylene response pathway. Involved in wound signaling by binding specifically to the DNA sequence 5'- ATGTACCT-3' found in the promoter of some wound-inducible genes. Required for ethylene-promoted coleoptile elongation. Acts as negative regulator of salt tolerance. During salt stress, activates the cation transporter HKT1, which mediates increased sodium uptake in roots, and contributes to sodium accumulation and salt toxicity. Possesses transactivation activity in protoplasts.
     
 0.517
EIL1B
Protein ETHYLENE-INSENSITIVE 3-like 1b; Transcription factor acting as a positive regulator in the ethylene response pathway. Involved in wound signaling by binding specifically to the DNA sequence 5'-ATGTACCT-3' found in the promoter of some wound-inducible genes. Binds directly to the DNA sequence 5'-TGTTACAAATACC-3' in the promoter of the GA20OX2 gene to activate its expression at the transcriptional level during ethylene signaling. Belongs to the EIN3 family.
     
 0.517
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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