STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6K7X3_ORYSJcDNA clone:J013170D14, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1031 aa)    
Predicted Functional Partners:
C7J1U6_ORYSJ
Os04g0589400 protein.
    
 0.615
Q8L460_ORYSJ
cDNA, clone: J100058K04, full insert sequence.
    
  0.575
A0A0P0Y2V6
Os11g0495400 protein.
    
  0.559
Q7XM15_ORYSJ
cDNA, clone: J075162F09, full insert sequence.
    
  0.559
A0A0P0VFG2
Os02g0179900 protein.
    
  0.555
OsJ_17170
U1 small nuclear ribonucleoprotein A; Involved in nuclear pre-mRNA splicing.
    
 0.534
Q10M15_ORYSJ
RNA recognition motif family protein, expressed.
    
 0.534
OsJ_10509
U2 small nuclear ribonucleoprotein B'; Involved in nuclear pre-mRNA splicing.
    
 0.534
Q10PA9_ORYSJ
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.527
Q6YU78_ORYSJ
Small nuclear ribonucleoprotein Sm D3; Core component of the spliceosomal U1, U2, U4 and U5 small nuclear ribonucleoproteins (snRNPs), the building blocks of the spliceosome.
    
 0.527
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.