STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6YVN3_ORYSJOs08g0299700 protein. (298 aa)    
Predicted Functional Partners:
A0A0N7KNQ5
Os07g0574550 protein.
    
 0.745
A0A0P0WPY1
Os05g0534100 protein.
    
 0.745
A0A0P0X7U0
Os07g0574600 protein.
    
 0.745
A0A0P0X8C4
Os07g0574200 protein.
    
 0.745
SUMO1
Small ubiquitin-related modifier 1; Ubiquitin-like protein which can be covalently attached to target lysines as a monomer. Does not seem to be involved in protein degradation and may function as an antagonist of ubiquitin in the degradation process (By similarity).
    
 0.745
Q5ZCY3_ORYSJ
Os01g0372300 protein.
    
 0.745
Q6ZL08_ORYSJ
cDNA clone:002-134-H06, full insert sequence.
    
 0.745
Q8RZU9_ORYSJ
Small ubiquitin-related modifier.
    
 0.745
Q8W0H4_ORYSJ
Os01g0852300 protein.
    
 0.745
Q0JCJ0_ORYSJ
Os04g0466700 protein.
    
 0.718
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (28%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.