STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6YVY8_ORYSJcDNA clone:J013134N21, full insert sequence; Belongs to the protein kinase superfamily. Ser/Thr protein kinase family. (1084 aa)    
Predicted Functional Partners:
A0A0P0V1T6
Os01g0314700 protein.
    
  0.678
C7J1U6_ORYSJ
Os04g0589400 protein.
    
 0.648
RGB1
Guanine nucleotide-binding protein subunit beta; Guanine nucleotide-binding proteins (G proteins) are involved as modulators or transducers in various transmembrane signaling systems. The beta and gamma chains are required for the GTPase activity, for replacement of GDP by GTP, and for G protein-effector interaction.
   
 0.592
P5CS1
Delta-1-pyrroline-5-carboxylate synthase 1; P5CS plays a key role in proline biosynthesis, leading to osmoregulation in plants. Involved in abiotic stress tolerance. In the C-terminal section; belongs to the gamma-glutamyl phosphate reductase family.
    
 0.590
Q6K3D4_ORYSJ
Os02g0281000 protein.
    
 0.564
A0A0P0VAM2
Os01g0857300 protein.
    
  0.509
Q8RUE8_ORYSJ
Putative 3-phosphoinositide-dependent protein kinase-1.
    
 
0.504
A0A0P0XU08
Os10g0372500 protein.
    
  0.501
Q7XDE1_ORYSJ
cDNA clone:002-174-D09, full insert sequence.
    
  0.501
Q337H3_ORYSJ
1-acyl-sn-glycerol-3-phosphate acyltransferase; Belongs to the 1-acyl-sn-glycerol-3-phosphate acyltransferase family.
    
  0.489
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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