STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6Z244_ORYSJcDNA clone:J013039B08, full insert sequence; Belongs to the iron/ascorbate-dependent oxidoreductase family. (337 aa)    
Predicted Functional Partners:
A0A0P0WS15
Os06g0111600 protein.
     
 0.667
Q7XPV4_ORYSJ
Os04g0683700 protein.
     
 0.547
A0A0P0XZM3
Os11g0162000 protein.
   
 0.535
Q0JBE1_ORYSJ
cDNA clone:J023108N03, full insert sequence.
   
 0.535
Q6H657_ORYSJ
Os02g0644500 protein.
   
 0.535
CCS
Copper chaperone for superoxide dismutase, chloroplastic; Copper chaperone for superoxide dismutases (SODs). Binds copper ions and delivers them specifically to SODs. Is required for assistance in SODs disulfide bond formation and thereby activation of SODs (By similarity).
   
  
 0.431
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.