STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PUT1Polyamine transporter PUT1; Cell membrane polyamine/proton symporter involved in the polyamine uptake in cells. Possesses high affinity for spermidine and lower affinity for spermine and putrescine. Transports paraquat, a polyamine analog, and thus confers sensitivity to this chemical which is used as a herbicide; Belongs to the amino acid-polyamine-organocation (APC) superfamily. Polyamine:cation symporter (PHS) (TC 2.A.3.12) family. (531 aa)    
Predicted Functional Partners:
A0A0N7KLH2
3-phosphoshikimate 1-carboxyvinyltransferase; Belongs to the EPSP synthase family.
   
 0.721
A0A0P0V2P3
Os01g0375350 protein.
   
 0.721
A0A0P0V319
Os01g0375500 protein.
   
 0.721
Q0IMW8_ORYSJ
Os12g0534000 protein.
   
 0.721
Q5ZCV1_ORYSJ
Os01g0375200 protein.
   
 0.721
Q651F0_ORYSJ
Os09g0539100 protein.
   
 0.721
A0A0P0VPT7
Alpha-amylase; Belongs to the glycosyl hydrolase 13 family.
    
 0.700
A0A0P0W356
Os03g0756700 protein.
    
 0.700
A0A0P0WVQ1
Os06g0286310 protein.
    
 0.700
A0A0P0XFZ1
Os08g0391501 protein.
    
 0.700
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.