STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6Z9X4_ORYSJOs08g0407000 protein; Belongs to the TRAFAC class TrmE-Era-EngA-EngB-Septin-like GTPase superfamily. TrmE GTPase family. (552 aa)    
Predicted Functional Partners:
Q5JN40_ORYSJ
Os01g0960300 protein.
 
 0.988
Q0DSB4_ORYSJ
Os03g0321400 protein.
  
 0.967
Q0JCQ8_ORYSJ
Os04g0455900 protein.
  
 0.967
Q10CF7_ORYSJ
Serologically defined breast cancer antigen NY-BR-84, putative, expressed.
  
 0.967
PDIL5-4
Protein disulfide isomerase-like 5-4; Acts as a protein-folding catalyst that interacts with nascent polypeptides to catalyze the formation, isomerization, and reduction or oxidation of disulfide bonds. May play a role in storage protein biogenesis (By similarity).
  
 0.967
Q6F325_ORYSJ
Os05g0490200 protein.
  
 0.967
Q53KJ1_ORYSJ
GTP-binding proteins, putative, expressed.
 
 
 0.914
Q10R16_ORYSJ
tRNA methyl transferase family protein, expressed.
  
 0.908
Q10F15_ORYSJ
RNA methyltransferase, TrmH family protein, expressed.
   
 
 0.873
B7EFL6_ORYSJ
cDNA clone:J023001D05, full insert sequence.
   
   0.867
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.