STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q6ZFI6_ORYSJcDNA clone:J013000A23, full insert sequence. (402 aa)    
Predicted Functional Partners:
Q6ZKM0_ORYSJ
cDNA clone:J013001O15, full insert sequence.
    
 0.984
Q10R45_ORYSJ
Alanine-glyoxylate aminotransferase 2, mitochondrial, putative, expressed; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.981
ICL
Isocitrate lyase; Involved in storage lipid mobilization during the growth of higher plant seedling.
  
 
 0.979
Q7XPR2_ORYSJ
Aminomethyltransferase; The glycine cleavage system catalyzes the degradation of glycine; Belongs to the GcvT family.
  
 
 0.979
A0A0P0VX85
Os03g0338000 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.978
Q65WV6_ORYSJ
Os05g0475400 protein; Belongs to the class-III pyridoxal-phosphate-dependent aminotransferase family.
  
 0.978
Q69UU3_ORYSJ
cDNA clone:J013118J02, full insert sequence.
  
 0.978
GLO4
Peroxisomal (S)-2-hydroxy-acid oxidase GLO4; Photorespiratory enzyme that can exert a strong regulation over photosynthesis, possibly through a feed-back inhibition on Rubisco activase. Not required for oxalate accumulation (By similarity). Belongs to the FMN-dependent alpha-hydroxy acid dehydrogenase family.
  
 0.978
MS
Malate synthase; Belongs to the malate synthase family.
  
 
 0.977
Q8W314_ORYSJ
Threonine dehydratase.
  
 0.976
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.