STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q75G54_ORYSJPost-GPI attachment to proteins factor 3; Involved in the lipid remodeling steps of GPI-anchor maturation; Belongs to the PGAP3 family. (349 aa)    
Predicted Functional Partners:
Q67UJ7_ORYSJ
cDNA clone:J033071H10, full insert sequence.
    
 
 0.659
Q84MV9_ORYSJ
Ser/Thr protein phosphatase family protein, expressed.
    
 
 0.659
Q67TV0_ORYSJ
GPI inositol-deacylase; Involved in inositol deacylation of GPI-anchored proteins which plays important roles in the quality control and ER-associated degradation of GPI-anchored proteins.
    
 
 0.560
Q6Z6K3_ORYSJ
cDNA clone:J023126A08, full insert sequence.
    
 
 0.530
Q7XP63_ORYSJ
cDNA clone:J033097L06, full insert sequence.
      
 0.457
A0A0P0WK37
Os05g0290300 protein.
   
  
 0.453
Q84LH5_ORYSJ
Alkaline phytoceramidase family protein, expressed.
      
 0.447
A0A0P0Y212
Os11g0479232 protein.
      
 0.444
Q10FE9_ORYSJ
GPI mannosyltransferase 1; Mannosyltransferase involved in glycosylphosphatidylinositol- anchor biosynthesis. Transfers the first alpha-1,4-mannose to GlcN- acyl-PI during GPI precursor assembly.
      
 0.438
Q0DKT8_ORYSJ
Os05g0144000 protein; Belongs to the membrane-bound acyltransferase family.
   
 
 0.432
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.