STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q7G466_ORYSJPhosphoenolpyruvate carboxykinase, putative, expressed. (637 aa)    
Predicted Functional Partners:
Q5QLS8_ORYSJ
Malate dehydrogenase.
    
 0.948
PPDK1
Pyruvate, phosphate dikinase 1, chloroplastic; Formation of phosphoenolpyruvate. The cytoplasmic isoform supports the biosynthetic processes in the nascent endosperm and provides an efficient mechanism for glycolytic ATP synthesis in oxygen depleted tissues. May be involved in regulating the flux of carbon into starch and fatty acids of seeds and in the remobilization of nitrogen reserves in senescing leaves; Belongs to the PEP-utilizing enzyme family.
     
 0.948
Q8H4E0_ORYSJ
cDNA clone:001-030-A01, full insert sequence.
    
 0.948
PPDK2
Pyruvate, phosphate dikinase 2; Formation of phosphoenolpyruvate.
     
 0.942
Q0J5H3_ORYSJ
Malate dehydrogenase.
    
 0.936
Q6F361_ORYSJ
Malate dehydrogenase.
    
 0.935
Q6YYW3_ORYSJ
cDNA clone:001-205-B06, full insert sequence.
    
 0.934
Q5VNT9_ORYSJ
Os06g0136600 protein.
    
 0.930
ENO1
Enolase; Belongs to the enolase family.
    
 0.928
P0460E08.21
Aspartate aminotransferase, cytoplasmic; Important for the metabolism of amino acids and Krebs-cycle related organic acids. In plants, it is involved in nitrogen metabolism and in aspects of carbon and energy metabolism; Belongs to the class-I pyridoxal-phosphate-dependent aminotransferase family.
     
 0.925
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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