STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q7Y139_ORYSJHuntingtin interacting protein K, putative, expressed. (127 aa)    
Predicted Functional Partners:
Q5ZDJ3_ORYSJ
Os01g0617500 protein.
    
 
 0.967
Q7XQS0_ORYSJ
cDNA clone:001-038-E01, full insert sequence.
   
 
 0.961
A2ZVA8_ORYSJ
cDNA, clone: J065077N17, full insert sequence.
   
 
 0.920
C7IYZ1_ORYSJ
Os02g0694201 protein.
   
 
 0.920
A0A0P0VIQ7
Os02g0462900 protein.
   
  
 0.623
Q0DM69_ORYSJ
Os03g0825400 protein.
   
    0.523
Q7XI32_ORYSJ
Os07g0243100 protein.
   
    0.523
Q5Z4U6_ORYSJ
Os06g0698859 protein.
    
 
 0.483
Q6Z422_ORYSJ
Os02g0149600 protein.
    
 
 0.483
Q7EZ93_ORYSJ
cDNA clone:J023007J12, full insert sequence.
    
 
 0.483
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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