STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q8LHA1_ORYSJcDNA clone:J023114G08, full insert sequence. (390 aa)    
Predicted Functional Partners:
Q5JLP6_ORYSJ
S-formylglutathione hydrolase; Serine hydrolase involved in the detoxification of formaldehyde.
 
 0.996
C7IWJ1_ORYSJ
Os01g0847800 protein.
   
 0.949
Q10A46_ORYSJ
Alcohol dehydrogenase 2, putative, expressed.
  
  
 
0.942
Q10QN9_ORYSJ
Oxidoreductase, zinc-binding dehydrogenase family protein, expressed.
  
  
0.942
Q10QP0_ORYSJ
Oxidoreductase, zinc-binding dehydrogenase family protein, expressed.
  
  
 
0.941
Q6H5W1_ORYSJ
cDNA clone:J033069E14, full insert sequence.
  
  
 
0.941
Q941T6_ORYSJ
cDNA clone:J033138E18, full insert sequence.
   
 0.924
Q941T8_ORYSJ
cDNA, clone: J090081K17, full insert sequence.
   
 0.924
Q69P84_ORYSJ
cDNA clone:001-032-H04, full insert sequence; Belongs to the aldehyde dehydrogenase family.
  
 0.903
A0A0P0Y7S8
Os12g0178000 protein.
  
 0.889
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.