STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q8LNH6_ORYSJMicrotubule-associated EB1 family protein, putative, expressed. (332 aa)    
Predicted Functional Partners:
Q0JC85_ORYSJ
cDNA clone:001-007-B02, full insert sequence.
   
 0.968
Q5SNH4_ORYSJ
cDNA clone:006-304-B11, full insert sequence; Belongs to the protein kinase superfamily.
   
 0.945
Q10EP9_ORYSJ
Serine/threonine-protein kinase 12, putative, expressed; Belongs to the protein kinase superfamily.
   
 0.941
A0A0P0VG47
Os02g0198400 protein.
   
 
 0.899
A0A0P0V598
Os01g0612000 protein; Belongs to the class I-like SAM-binding methyltransferase superfamily. C5-methyltransferase family.
     
 0.896
Q0JCR2_ORYSJ
Os04g0454900 protein.
   
 0.877
Q7F8R8_ORYSJ
cDNA clone:001-017-E12, full insert sequence.
   
 0.877
A0A0P0VQA0
Os02g0760200 protein.
   
 
 0.875
Q656M9_ORYSJ
Os06g0255200 protein.
    
 0.875
A0A0P0V9P2
Os01g0816500 protein.
   
 
 0.870
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.