STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q9AUR4_ORYSJDNA-directed RNA polymerase subunit; DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates. Belongs to the archaeal rpoM/eukaryotic RPA12/RPB9/RPC11 RNA polymerase family. (126 aa)    
Predicted Functional Partners:
A0A0P0XVR4
Os10g0495600 protein; Belongs to the RNA polymerase beta chain family.
   
 0.999
Q2QWI0_ORYSJ
RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein, expressed.
  
 0.999
Q2R177_ORYSJ
cDNA clone:J023014N04, full insert sequence.
   
 0.999
Q2R8T1_ORYSJ
cDNA clone:J023065O17, full insert sequence.
  
 0.999
B9GDH8_ORYSJ
Os12g0533600 protein.
   
 0.998
Q5VRF7_ORYSJ
cDNA clone:002-148-H10, full insert sequence.
   
 0.998
A0A0P0X0W6
Os06g0697400 protein.
   
 0.997
Q84SP5_ORYSJ
RNA polymerase Rpb8 family protein, expressed; Belongs to the eukaryotic RPB8 RNA polymerase subunit family.
   
 0.997
Q10MU2_ORYSJ
RNA polymerase Rpb3/Rpb11 dimerisation domain containing protein, expressed.
   
 0.996
Q653F3_ORYSJ
cDNA clone:J033026O11, full insert sequence.
   
 0.996
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.