STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q9AV13_ORYSJOs10g0554900 protein. (369 aa)    
Predicted Functional Partners:
NIA1
Nitrate reductase [NADH] 1; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.857
Q6ZC33_ORYSJ
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.857
Q6ZHH7_ORYSJ
Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.
    
  0.857
Q6K3D4_ORYSJ
Os02g0281000 protein.
    
 0.750
C7J1U6_ORYSJ
Os04g0589400 protein.
    
 0.723
rps2
30S ribosomal protein S2, chloroplastic.
   
  0.719
Q9LWD2_ORYSJ
cDNA clone:001-104-E12, full insert sequence.
    
  0.714
Q656M9_ORYSJ
Os06g0255200 protein.
    
 0.713
Q6YU81_ORYSJ
cDNA clone:J033117P11, full insert sequence; Belongs to the universal ribosomal protein uS5 family.
   
  0.708
rps14
30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles.
    
 0.706
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.