STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RSH1Putative GTP diphosphokinase RSH1, chloroplastic; May be involved in a rapid plant ppGpp (guanosine 3'- diphosphate 5'-diphosphate)-mediated response to pathogens and other stresses. (892 aa)    
Predicted Functional Partners:
NDKR
Nucleoside diphosphate kinase 1; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate. This NDK is microtubule-associated.
    
 0.949
Q0IMS5_ORYSJ
Nucleoside diphosphate kinase.
    
 0.949
OsJ_31777
Inosine triphosphate pyrophosphatase; Pyrophosphatase that hydrolyzes non-canonical purine nucleotides such as inosine triphosphate (ITP), deoxyinosine triphosphate (dITP) or xanthosine 5'-triphosphate (XTP) to their respective monophosphate derivatives. The enzyme does not distinguish between the deoxy- and ribose forms. Probably excludes non-canonical purines from RNA and DNA precursor pools, thus preventing their incorporation into RNA and DNA and avoiding chromosomal lesions. Belongs to the HAM1 NTPase family.
    
 0.947
RIBA2
Probable bifunctional riboflavin biosynthesis protein RIBA 2, chloroplastic; Involved in riboflavin biosynthesis. Catalyzes both the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2- butanone 4-phosphate and the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate (By similarity); In the N-terminal section; belongs to the DHBP synthase family.
  
 
  0.903
RIBA3
Probable monofunctional riboflavin biosynthesis protein RIBA 3, chloroplastic; Involved in riboflavin biosynthesis. Catalyzes the conversion of GTP to 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate (By similarity); In the C-terminal section; belongs to the GTP cyclohydrolase II family.
  
 
  0.903
RIBA1
Probable bifunctional riboflavin biosynthesis protein RIBA 1, chloroplastic; Involved in riboflavin biosynthesis. Catalyzes both the conversion of D-ribulose 5-phosphate to formate and 3,4-dihydroxy-2- butanone 4-phosphate and the conversion of GTP to 2,5-diamino-6- ribosylamino-4(3H)-pyrimidinone 5'-phosphate (DARP), formate and pyrophosphate (By similarity); In the N-terminal section; belongs to the DHBP synthase family.
  
 
  0.903
Q2QQ49_ORYSJ
Molybdenum cofactor biosynthesis protein 1 A, putative, expressed.
    
 0.895
A0A0P0WFZ8
Os04g0662700 protein.
     
 0.893
Q5KQH1_ORYSJ
Os05g0595500 protein.
    
 0.888
Q5TKF4_ORYSJ
Nucleoside diphosphate kinase.
    
 0.888
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.