Export your current network:
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
| node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
| A0A0P0W059 | EFGM_ORYSJ | A0A0P0W059 | Q9FE64 | Os03g0612600 protein. | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation fact [...] | 0.931 |
| A0A0P0W059 | Q0JBZ7_ORYSJ | A0A0P0W059 | Q0JBZ7 | Os03g0612600 protein. | Os04g0501000 protein; Belongs to the universal ribosomal protein uL23 family. | 0.994 |
| A0A0P0W059 | Q851P5_ORYSJ | A0A0P0W059 | Q851P5 | Os03g0612600 protein. | 40S ribosomal protein S15, putative, expressed; Belongs to the universal ribosomal protein uS19 family. | 0.994 |
| A0A0P0W059 | Q9LWD2_ORYSJ | A0A0P0W059 | Q9LWD2 | Os03g0612600 protein. | cDNA clone:001-104-E12, full insert sequence. | 0.999 |
| A0A0P0W059 | RPL27 | A0A0P0W059 | O65037 | Os03g0612600 protein. | 50S ribosomal protein L27, chloroplastic; Belongs to the bacterial ribosomal protein bL27 family. | 0.999 |
| A0A0P0W059 | RPS15 | A0A0P0W059 | P31674 | Os03g0612600 protein. | 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. | 0.994 |
| A0A0P0W059 | rps14 | A0A0P0W059 | P0C467 | Os03g0612600 protein. | 30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles. | 0.993 |
| A0A0P0XU17 | EFGM_ORYSJ | A0A0P0XU17 | Q9FE64 | Os10g0411700 protein. | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation fact [...] | 0.954 |
| A0A0P0XU17 | Q0JBZ7_ORYSJ | A0A0P0XU17 | Q0JBZ7 | Os10g0411700 protein. | Os04g0501000 protein; Belongs to the universal ribosomal protein uL23 family. | 0.995 |
| A0A0P0XU17 | Q851P5_ORYSJ | A0A0P0XU17 | Q851P5 | Os10g0411700 protein. | 40S ribosomal protein S15, putative, expressed; Belongs to the universal ribosomal protein uS19 family. | 0.999 |
| A0A0P0XU17 | RPS15 | A0A0P0XU17 | P31674 | Os10g0411700 protein. | 40S ribosomal protein S15; Belongs to the universal ribosomal protein uS19 family. | 0.999 |
| A0A0P0XU17 | RPS19A | A0A0P0XU17 | P40978 | Os10g0411700 protein. | 40S ribosomal protein S19; Belongs to the eukaryotic ribosomal protein eS19 family. | 0.999 |
| A0A0P0XU17 | rps14 | A0A0P0XU17 | P0C467 | Os10g0411700 protein. | 30S ribosomal protein S14, chloroplastic; Binds 16S rRNA, required for the assembly of 30S particles. | 0.998 |
| B9F460_ORYSJ | EFGM_ORYSJ | B9F460 | Q9FE64 | Os02g0810450 protein. | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation fact [...] | 0.983 |
| EFGM_ORYSJ | A0A0P0W059 | Q9FE64 | A0A0P0W059 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation fact [...] | Os03g0612600 protein. | 0.931 |
| EFGM_ORYSJ | A0A0P0XU17 | Q9FE64 | A0A0P0XU17 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation fact [...] | Os10g0411700 protein. | 0.954 |
| EFGM_ORYSJ | B9F460_ORYSJ | Q9FE64 | B9F460 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation fact [...] | Os02g0810450 protein. | 0.983 |
| EFGM_ORYSJ | Q0JBZ7_ORYSJ | Q9FE64 | Q0JBZ7 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation fact [...] | Os04g0501000 protein; Belongs to the universal ribosomal protein uL23 family. | 0.930 |
| EFGM_ORYSJ | Q851P5_ORYSJ | Q9FE64 | Q851P5 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation fact [...] | 40S ribosomal protein S15, putative, expressed; Belongs to the universal ribosomal protein uS19 family. | 0.930 |
| EFGM_ORYSJ | Q9LWD2_ORYSJ | Q9FE64 | Q9LWD2 | Elongation factor G, mitochondrial; Mitochondrial GTPase that catalyzes the GTP-dependent ribosomal translocation step during translation elongation. During this step, the ribosome changes from the pre-translocational (PRE) to the post-translocational (POST) state as the newly formed A-site-bound peptidyl-tRNA and P-site-bound deacylated tRNA move to the P and E sites, respectively. Catalyzes the coordinated movement of the two tRNA molecules, the mRNA and conformational changes in the ribosome. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation fact [...] | cDNA clone:001-104-E12, full insert sequence. | 0.960 |
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