STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Q9FTI1_ORYSJcDNA clone:002-172-A05, full insert sequence; Belongs to the peptidase C1 family. (359 aa)    
Predicted Functional Partners:
Q6YVE5_ORYSJ
cDNA clone:001-026-F06, full insert sequence.
    
  0.810
Q0JE83_ORYSJ
Os04g0311400 protein; Belongs to the peptidase C1 family.
  
0.602
Q65X08_ORYSJ
cDNA clone:J023146P19, full insert sequence.
    
 0.591
Q6K7A3_ORYSJ
cDNA clone:J013002F17, full insert sequence; Belongs to the peptidase C1 family.
  
0.587
Q6Z0Y9_ORYSJ
cDNA clone:001-038-G01, full insert sequence; Belongs to the WD repeat SEC13 family.
    
  0.586
Q851A2_ORYSJ
cDNA clone:J033132M13, full insert sequence; Belongs to the WD repeat SEC13 family.
    
  0.586
Q8GVR2_ORYSJ
cDNA clone:001-115-C06, full insert sequence; Belongs to the peptidase C1 family.
  
0.584
B9GBH9_ORYSJ
Os12g0112200 protein.
   
 
 0.550
Q0IV51_ORYSJ
Saposin-like type B, region 1 family protein, expressed.
   
 
 0.550
Q5VQH7_ORYSJ
cDNA clone:J013119N08, full insert sequence.
   
 
 0.550
Your Current Organism:
Oryza sativa Japonica
NCBI taxonomy Id: 39947
Other names: Japanese rice, Japonica rice, O. sativa Japonica Group, Oryza sativa (japonica cultivar-group), Oryza sativa Japonica Group, Oryza sativa subsp. japonica
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.