STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Smar_1142PFAM: glycoside hydrolase, family 38; glycosyl hydrolases 38 domain protein; KEGG: pho:PH0835 856aa long hypothetical alpha-mannosidase. (851 aa)    
Predicted Functional Partners:
Smar_0014
PFAM: glycoside hydrolase, family 38; glycosyl hydrolases 38 domain protein; KEGG: sto:ST1008 alpha-mannosidase.
  
  
 
0.919
Smar_0706
PFAM: glycoside hydrolase, family 4; KEGG: tma:TM1834 alpha-glucosidase.
 
   
 0.559
Smar_0613
PFAM: alpha amylase, catalytic region; SMART: alpha amylase, catalytic sub domain; KEGG: oih:OB2561 cyclomaltodextrinase.
 
  
 0.479
Smar_1143
Hypothetical protein.
       0.438
Smar_1514
Glucokinase; PFAM: ROK family protein; KEGG: pai:PAE3437 glucokinase (ROK family protein), conjectural.
  
  
 0.422
Smar_1153
PFAM: GHMP kinase; GHMP kinase, C terminal domain protein; KEGG: pai:PAE1185 galactokinase.
   
    0.400
Your Current Organism:
Staphylothermus marinus
NCBI taxonomy Id: 399550
Other names: S. marinus F1, Staphylothermus marinus ATCC 43588, Staphylothermus marinus DSM 3639, Staphylothermus marinus F1, Staphylothermus marinus JCM 9404, Staphylothermus marinus str. F1, Staphylothermus marinus strain F1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.