STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Hypma_011407Uncharacterized protein. (755 aa)    
Predicted Functional Partners:
cdc1
DNA polymerase subunit delta-2.
    
 0.622
Hypma_014988
Uncharacterized protein.
    
 0.605
rad16
DNA repair protein rad16.
    
 0.601
SmE
Small nuclear ribonucleoprotein E; Associated with the spliceosome snRNP U1, U2, U4/U6 and U5. Belongs to the snRNP Sm proteins family.
   
  0.575
Hypma_009574
Putative small nuclear ribonucleoprotein F.
    
  0.574
smd2
Small nuclear ribonucleoprotein Sm D2.
    
 0.560
pol3_1
DNA polymerase delta catalytic subunit.
   
 0.557
pol3_0
DNA polymerase.
   
 0.557
HAT2
Histone acetyltransferase type B subunit 2.
    
  0.536
dna2
DNA replication ATP-dependent helicase/nuclease dna2.
    
  0.534
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.