Hypma_006397 protein (Hypsizygus marmoreus) - STRING interaction network

Nodes:

Network nodes represent proteins

splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

Node Color

colored nodes:
query proteins and first shell of interactors

white nodes:
second shell of interactors

Node Content

empty nodes:
proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

Edges:

Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

Neighborhood

Gene Fusion

Cooccurrence

Coexpression

Experiments

Databases

Textmining

[Homology]

Score

Hypma_006397

Uncharacterized protein. (242 aa)

Predicted Functional Partners:

DYR

0.626

Hypma_000134

0.626

YAH1

0.606

OLE1_1

0.579

OLE1_2

0.579

OLE1_0

0.579

bud22

0.507

NAR1_1

0.485

DCI1

0.476

terA

0.473

Your Current Organism:

Hypsizygus marmoreus

NCBI taxonomy Id: 39966
Other names: H. marmoreus

Send network to Cytoscape

Export your current network:

... as a bitmap image:

download

file format is 'PNG': portable network graphic

... as a high-resolution bitmap:

download

same PNG format, but at higher resolution

... as a vector graphic:

download

SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc

... as short tabular text output:

download

TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)

... as tabular text output:

download

TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)

... as an XML summary:

download

structured XML interaction data, according to the 'PSI-MI' data standard

... protein node degrees:

download

node degree of proteins in your network (given the current score cut-off)

... network coordinates:

download

a flat-file format describing the coordinates and colors of nodes in the network

... protein sequences:

download

MFA: multi-fasta format - containing the aminoacid sequences in the network

... protein annotations:

download

a tab-delimited file describing the names, domains and descriptions of proteins in your network

... functional annotations:

download

a tab-delimited file containing all known functional terms of protiens in your network

Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
DCI1	Hypma_000134	A0A369JKE6	A0A369K8N8	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase.	Carrier domain-containing protein.	0.700
DCI1	Hypma_006397	A0A369JKE6	A0A369JZR6	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase.	Uncharacterized protein.	0.476
DCI1	NAR1_1	A0A369JKE6	A0A369KD47	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.548
DCI1	OLE1_0	A0A369JKE6	A0A369KCF7	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.518
DCI1	OLE1_1	A0A369JKE6	A0A369JRV9	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.518
DCI1	OLE1_2	A0A369JKE6	A0A369JWL6	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.518
DCI1	YAH1	A0A369JKE6	A0A369K983	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase.	Adrenodoxin, mitochondrial.	0.664
DCI1	terA	A0A369JKE6	A0A369IYE7	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase.	Non-reducing polyketide synthase terA.	0.557
DYR	Hypma_000134	A0A369K6G8	A0A369K8N8	Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.	Carrier domain-containing protein.	0.503
DYR	Hypma_006397	A0A369K6G8	A0A369JZR6	Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.	Uncharacterized protein.	0.626
DYR	NAR1_1	A0A369K6G8	A0A369KD47	Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.	Nitrate reductase; Nitrate reductase is a key enzyme involved in the first step of nitrate assimilation in plants, fungi and bacteria.	0.436
Hypma_000134	DCI1	A0A369K8N8	A0A369JKE6	Carrier domain-containing protein.	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase.	0.700
Hypma_000134	DYR	A0A369K8N8	A0A369K6G8	Carrier domain-containing protein.	Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.	0.503
Hypma_000134	Hypma_006397	A0A369K8N8	A0A369JZR6	Carrier domain-containing protein.	Uncharacterized protein.	0.626
Hypma_000134	OLE1_0	A0A369K8N8	A0A369KCF7	Carrier domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.552
Hypma_000134	OLE1_1	A0A369K8N8	A0A369JRV9	Carrier domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.552
Hypma_000134	OLE1_2	A0A369K8N8	A0A369JWL6	Carrier domain-containing protein.	Acyl-CoA desaturase; Stearyl-CoA desaturase that utilizes O(2) and electrons from reduced cytochrome b5 to introduce the first double bond into saturated fatty acyl-CoA substrates.	0.552
Hypma_000134	terA	A0A369K8N8	A0A369IYE7	Carrier domain-containing protein.	Non-reducing polyketide synthase terA.	0.717
Hypma_006397	DCI1	A0A369JZR6	A0A369JKE6	Uncharacterized protein.	Delta(3,5)-Delta(2,4)-dienoyl-CoA isomerase.	0.476
Hypma_006397	DYR	A0A369JZR6	A0A369K6G8	Uncharacterized protein.	Dihydrofolate reductase; Belongs to the dihydrofolate reductase family.	0.626