STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rrb1_1Ribosome assembly protein rrb1. (498 aa)    
Predicted Functional Partners:
elf1
mRNA export factor elf1.
   
   0.935
Hypma_013319
Uncharacterized protein.
   
 
 0.909
ERB1
Ribosome biogenesis protein ERB1; Component of the NOP7 complex, which is required for maturation of the 25S and 5.8S ribosomal RNAs and formation of the 60S ribosome.
   
 
 0.899
Hypma_010752
U3 small nucleolar RNA-associated protein 21.
   
 
 0.891
HAS1
RNA helicase.
   
   0.874
Hypma_014333
Putative ribosome biogenesis protein C8F11.04.
   
 
 0.867
dbp9
ATP-dependent RNA helicase dbp9.
   
 
 0.860
Hypma_006665
Putative WD repeat-containing protein C17D11.16.
   
  
0.859
RRP5
rRNA biogenesis protein RRP5.
   
 
 0.850
Hypma_013957
Periodic tryptophan protein 2.
   
  
 0.849
Your Current Organism:
Hypsizygus marmoreus
NCBI taxonomy Id: 39966
Other names: H. marmoreus
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.